Fixture removed
no
The run did not use --recipe-fixture.
Phase 1 / reader bridge
A quote-grounded SimpleFold recipe was produced through the runner without using the engineering recipe fixture. This is manual curation, not autonomous Reader-agent extraction.
no
The run did not use --recipe-fixture.
manual
Command adapter with quote-grounded curated output.
dry
No model inference was executed; this is not a reproduction result.
The local runner can now produce reader_raw.txt, recipe.json, verdict.json, and card.json without relying on the engineering fixture recipe. The SimpleFold recipe is grounded in primary-source text from the arXiv PDF and Apple repository.
This does not prove autonomous Reader-agent extraction, SimpleFold paper reproduction, or biological benchmark performance. The validator status is successful_with_caveat because dry-run scores are synthetic.
| Field | Value |
|---|---|
| Run ID | phase1-no-fixture-manual-simplefold-reader-2026-05-14-v2 |
| Headline metric | CASP14 SimpleFold-3B median LDDT |
| Published value | 0.709 |
| Evaluation targets | 70 CASP14 target labels |
| Quote entries | 13 |
| Audit entries | 100 |